Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890052.1_cds_XP_016444729.1_39758
CDS Infomation

[gene=LOC107769989] [db_xref=GeneID:107769989] [protein=geranylgeranyl diphosphate reductase, chloroplastic-like] [protein_id=XP_016444729.1] [location=complement(2081..3442)] [gbkey=CDS]
Sequence

ATGGCCGCCCAAACACACCTTCTTCACCCTCTTCACTGTCTTCCAGTTTCACTCAAAACC
CAAAACCCACAAAAGCAATACCATTACTTCAAACACAAACCCATAAATCCAGTTGTCTCC
AAGCTTCGAGCAGCCGTTATAGGCGGCGGCCCAGCTGGATCTTCAGCTGCAGAAGCTTTA
GCCAGCGGAGGAGTCGAAACTTTCCTCTTCGAACGCAGCCCAGCTTCGGCCAAGCCATGC
GGCGGCGCCATTCCTCTTTGCATGCTCGACGAGTTCTCACTACCTTATCACCTCATCGAT
CGCCGCGTCACTCAGATGAGAATCATTTCTCCGTCGAATCTCGTCGTCGATTTCGGCAAA
ACCCTAAAACCTCACGAGTTCATCGCCATGCTCCGCCGTGAAGTTCTCGACTCGTTCCTC
CGCCGCCGCGCCGAGTCTAGCGGCGCCACTCTCATGAAAGCACTCGTCACTAACCTTGTG
GTCCCTACATCCTCGCACGAGCCGTATGTGATTCATTACACTATGGATAATTGCCAGCGT
CAGCTTGCCGTCGATGTTATCGTCGGCGCCGACGGAGCCAATAGCCGGGTGGCTAAATCG
ATCAAAGCTGGAAATTACGCTACTGCCATTGCTTTCCAAGAGAGGATTAAATTGCCCGAG
GACAAAATGGGGTATTACGAAAATTTGGCTGAGATGTACGTGGGGAATGACGTGTCACCC
GATTTTTACGCGTGGGTGTTTCCCAAATGTGACCACGTGGCAGTGGGGACGGGCACGATG
TGCTCAAAGTCTAATATCAAGTTATTTCAGCATGGTATCAGAGCCCGAGTCAAATCAAAG
ATTGACGGCGGACGAGTGATTAAAGTGGAGGCGCATCCAATACCGGAGCATCCGCGCCCG
ATTCGGGTACGTGGACGAGTTGCTCTAGTAGGAGATGCGGCAGGATACGTGACAAAATGT
TCAGGCGAAGGAATATATTTTGCAGCAAAAAGTGGAAGAATTTGTGGGGAAGCAATAGCG
AAGGCCTCAGAAGGCGGAGAGAAGATGATTAGTGAAGATGATTTGAAAAGGGAGTATTTA
AGAAAGTGGGATGACAAGTATTTCACAACTTTCAAGTTTTTGGATATATTGCAAAAAGTG
TTTTATGGTAGCAATGCAGCAAGGGAAGCATTAGTGGAGTTATGTGGAGATGAGTATGTC
CAAAGGATGACATTTGATAGCTACTTGTATAAGAAATTAGCTAGTGGCAATAGATTGAAT
GATGCTAAAATGGTGATGAACACAATTTCAAGTTTGGTTAGGTGTAATATTATGGGACGA
GAAGTTGAAGCATCTGCCCAAAAAATTCTCTCACGAGTATAG

Peptide Sequence

PEP ID

XP_016444729.1
PEP Infomation

PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAQTHLLHPLHCLPVSLKTQNPQKQYHYFKHKPINPVVSKLRAAVIGGGPAGSSAAEAL
ASGGVETFLFERSPASAKPCGGAIPLCMLDEFSLPYHLIDRRVTQMRIISPSNLVVDFGK
TLKPHEFIAMLRREVLDSFLRRRAESSGATLMKALVTNLVVPTSSHEPYVIHYTMDNCQR
QLAVDVIVGADGANSRVAKSIKAGNYATAIAFQERIKLPEDKMGYYENLAEMYVGNDVSP
DFYAWVFPKCDHVAVGTGTMCSKSNIKLFQHGIRARVKSKIDGGRVIKVEAHPIPEHPRP
IRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRICGEAIAKASEGGEKMISEDDLKREYL
RKWDDKYFTTFKFLDILQKVFYGSNAAREALVELCGDEYVQRMTFDSYLYKKLASGNRLN
DAKMVMNTISSLVRCNIMGREVEASAQKILSRV

Transcript Sequence

Gene sequence data has not been registered.